Modules

Mod 4122015

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July 27, 2016, at 08:47 AM by 139.80.236.40 -
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!Module 412: Computational Inference
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!Module 412: Computational Inference (in years 2014 and 2015)
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Links:

[[Mod412_2015 | Module 412 in 2015]]

[[http://www.otago.ac.nz/physics/postgraduate/postgraduate-papers/otago050695.html#Mod12 | Department of Physics 400-level information]]
July 27, 2016, at 08:45 AM by 139.80.236.40 -
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(:notitle:)
!Module 412: Computational Inference
Module 412 develops '''Computational Inference''':
Bayesian inference for uncertainty quantification, stochastic modelling and MCMC sampling,
advanced Monte Carlo strategies, imaging and machine vision.

Semester: 2

''Recommended Preparation:'' Inverse Problems and Imaging module

''Lecturer:'' [[http://elec.otago.ac.nz/w/index.php/Colin_Fox | Colin Fox]]. Room 503. Ph 4797806. colin.fox 'at' otago.ac.nz

''Assessment:'' 30% assignments, 70% Exam

----

Resources:

*''Lecture 1: ''Problem and Goals
 *Gareth Roberts' [[http://www2.warwick.ac.uk/fac/sci/statistics/staff/academic-research/roberts/st911/notes2012partiii.pdf | notes on Statistical Inference]]
*''Lecture 2: ''Expectations
 *Adaptive rejection paper by Gilks Tan Best
*''Lecture 3:'' MCMC basics
 *
*''Lecture 4:'' Algorithmic Efficiency
 *Ulli Wollf's [[http://www.physik.hu-berlin.de/com/ALPHAsoft/ | UWerr MatLab code]] and documentation
*''Lecture 5:'' Inverse Diffusion Problem
*''Lecture 6:'' Image Reconstruction
*''Lecture 7:'' Linear/Gaussian problems
 *John Bardsley's [[http://www.math.umt.edu/bardsley/papers/MCMCforUQinInverseProblems.pdf | RTO paper]]
*''Lecture 8:'' Counting objects
 *

*''Assignment 1:''
 *[[Attach:Ass1_2014.pdf | Problem sheet]]
 *Matlab code for diffusion problem: [[Attach:Main.m | Main.m]] [[Attach:heat.m | heat.m]]
*''Assignment 2:''
 *[[Attach:Ass2_2014.pdf | Problem sheet]]
 *Matlab code for deblurring jupiter image:  [[Attach:jupiter1.tif | jupiter1.tif]]  [[Attach:jupiter.m | jupiter.m]]  [[Attach:deconv1.m | deconv1.m]]
*''Assignment 3:''
 *[[Attach:Ass3_2014.pdf | Problem sheet]]
 *Image of good and bad cells in Matlab mat format [[Attach:slide.mat | slide.mat]], or as [[Attach:slide.tif | slide.tif]]. Matlab code [[Attach:makefake.m | makefake.m]] that generated the image, and uses functions [[Attach:putgood.m | putgood.m]] and [[Attach:putbad.m | putbad.m]].



Links:

[[Mod412_2015 | Module 412 in 2015]]

[[http://www.otago.ac.nz/physics/postgraduate/postgraduate-papers/otago050695.html#Mod12 | Department of Physics 400-level information]]